PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00208.1.g00410.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 271aa    MW: 30198.8 Da    PI: 6.6054
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00208.1.g00410.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY35.81.6e-11140195259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEE.EE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkv.ersaedpkvveitYegeHnhe 59 
                                   +D ++WrKYG K++ gse+p sY     ++Cp+kk v +++++dp  + +t   eH++e
  Zpz_sc00208.1.g00410.1.sm.mk 140 NDRFHWRKYGEKKILGSEYP-SY--SDDHKCPAKKYVpQHNNSDPPQFLVTLVHEHTCE 195
                                   79******************.66..3566********5567789************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.8E-12128195IPR003657WRKY domain
SuperFamilySSF1182901.7E-11135195IPR003657WRKY domain
SMARTSM007741.6E-16139196IPR003657WRKY domain
PROSITE profilePS508119.454140197IPR003657WRKY domain
PfamPF031063.1E-12140195IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MSTRPKSETV SPPPPSPRAT SNQRDAAIQE LRRVSHLAAK LRQQLELIPE VDRLEAAADN  60
VSEIADAMES SLSILQSASE QYYSSEAGAM AMALPAVHSS DGSTGASRIA VPRARKVRHG  120
RGRLGEEVPI KEILTDAPEN DRFHWRKYGE KKILGSEYPS YSDDHKCPAK KYVPQHNNSD  180
PPQFLVTLVH EHTCEIFFRD EPSSSRSGSL QVLDFRNASV CPPLTATTLG LKKEEYTNIS  240
MYMHSYEYEL SQQMMPPNGD QANFSPGPRW S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008656396.17e-70PREDICTED: probable WRKY transcription factor 62 isoform X1
TrEMBLK3Z8R38e-88K3Z8R3_SETIT; Uncharacterized protein
STRINGSi022933m2e-87(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP99932944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.15e-13WRKY DNA-binding protein 55